| UID: | 000241121 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1zodA3 |
| Range: | A:3-325 |
| Ligands: | MES NA PLP |
| PDB: | 2dkb |
| PDB Description: | 2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE) |
| UniProt: | P16932 |
| Hsap BLAST neighbor: | Q9BYV1 |
| Species: | Burkholderia cepacia |
Structure of domain e2dkbA2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2dkbA2 of H-group "PLP-dependent transferases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2dkbA1 | A:x,y,z->A:Y,X,-Z+1/3 | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:x,y,z->A:Y,X,-Z+1/3 | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:Y,X,-Z+1/3->A:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA1 | A:Y,X,-Z+1/3->A:x,y,z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:x,y,z->A:-Y+1,-X+1,-Z+1/3 | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA1 | A:x,y,z->A:-Y+1,-X+1,-Z+1/3 | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA1 | A:-Y+1,-X+1,-Z+1/3->A:x,y,z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:-Y+1,-X+1,-Z+1/3->A:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA1 | A:x,y,z->A:-X+Y,Y,-Z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:x,y,z->A:-X+Y,Y,-Z | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA2 | A:-X+Y,Y,-Z->A:x,y,z | PLP-dependent transferases | Interaction Interface Pymol |
| e2dkbA1 | A:-X+Y,Y,-Z->A:x,y,z | C-terminal domain in some PLP-dependent transferases | Interaction Interface Pymol |
