ECOD: domain e2dkfD2

Domain ID e2dkfD2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Beta-Casp

UID:	001498814
Type:	Automatic domain
Parent:	e2dkfA3
Range:	D:195-378
PDB:	2dkf
PDB Description:	METALLO-BETA-LACTAMASE SUPERFAMILY PROTEIN
UniProt:	Q5SLP1
Hsap BLAST neighbor:	Q5TA45
Species:

Domain
In chain context
In PDB context

Structure of domain e2dkfD2

Domains in the same chain:

Download Pymol

e2dkfD1	D:1-194,D:379-431	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e2dkfD2	D:195-378	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2dkfA2	A:1-194,A:379-431	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e2dkfA3	A:195-378	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2dkfB2	B:1-194,B:379-431	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e2dkfB1	B:195-378	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2dkfC1	C:1-194,C:379-431	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e2dkfC2	C:195-378	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2dkfD1	D:1-194,D:379-431	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e2dkfD2	D:195-378	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2dkfD2 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2dkfA3	D:-X-1/2,Y-1/2,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2dkfC1	D:x,y,z->C:-X-1,Y,-Z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol