ECOD: domain e2dnsD1

Domain ID e2dnsD1

A: alpha complex topology
X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
F: Beta-lactamase

UID:	000062633
Type:	Automatic domain
Parent:	e1pwgA1
Range:	D:56-245
Ligands:	BA DPN
PDB:	2dns
PDB Description:	D-AMINO ACID AMIDASE
UniProt:	Q9LCC8
Species:	Ochrobactrum anthropi

Domains in the same chain:

Download Pymol

e2dnsD2	D:2-55,D:246-362	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsD1	D:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Domains in the same PDB:

e2dnsA2	A:2-55,A:246-362	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsA1	A:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2dnsB2	B:2-55,B:246-362	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsB1	B:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2dnsC2	C:3-55,C:246-362	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsC1	C:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2dnsD2	D:2-55,D:246-362	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsD1	D:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2dnsE2	E:2-55,E:246-361	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsE1	E:56-245	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2dnsF3	F:8-35,F:192-205,F:229-358	Profilin-like	a+b domain in beta-lactamase/transpeptidase-like proteins	a+b domain in beta-lactamase/transpeptidase-like proteins
e2dnsF2	F:36-191	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	alpha-helical domain in beta-lactamase/transpeptidase-like proteins

Structural contacts of domain e2dnsD1 of H-group "alpha-helical domain in beta-lactamase/transpeptidase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2dnsB2	D:x,y,z->B:X-1,Y,Z	a+b domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e2dnsB1	D:x,y,z->B:X,Y,Z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e2dnsC1	D:x,y,z->C:X-1,Y,Z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol
e2dnsA1	D:-X,Y-1/2,-Z+1->A:x,y,z	alpha-helical domain in beta-lactamase/transpeptidase-like proteins	Interaction Interface Pymol