Domain ID e2du7B1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: O-phosphoseryl-tRNA synthetase C-terminal domain
  • T: O-phosphoseryl-tRNA synthetase C-terminal domain
  • F: Unmapped domains
UID: 001509031
Type: Automatic domain
Parent: e2du3A2
Range: B:359-437,B:479-549
PDB: 2du7
PDB Description: O-PHOSPHOSERYL-TRNA SYNTHETASE
UniProt: Q59054
Species: Methanocaldococcus jannaschii

Structure of domain e2du7B1

Domains in the same chain:

e2du7B2 B:11-358 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2du7B1 B:359-437,B:479-549 Alpha-beta plaits O-phosphoseryl-tRNA synthetase C-terminal domain O-phosphoseryl-tRNA synthetase C-terminal domain
e2du7B3 B:438-478 SSHS domain SSHS domain in O-phosphoseryl-tRNA synthetase SSHS domain in O-phosphoseryl-tRNA synthetase

Domains in the same PDB:

e2du7A1 A:11-358 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2du7A2 A:359-437,A:479-549 Alpha-beta plaits O-phosphoseryl-tRNA synthetase C-terminal domain O-phosphoseryl-tRNA synthetase C-terminal domain
e2du7A3 A:438-478 SSHS domain SSHS domain in O-phosphoseryl-tRNA synthetase SSHS domain in O-phosphoseryl-tRNA synthetase
e2du7B2 B:11-358 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2du7B1 B:359-437,B:479-549 Alpha-beta plaits O-phosphoseryl-tRNA synthetase C-terminal domain O-phosphoseryl-tRNA synthetase C-terminal domain
e2du7B3 B:438-478 SSHS domain SSHS domain in O-phosphoseryl-tRNA synthetase SSHS domain in O-phosphoseryl-tRNA synthetase
e2du7C2 C:11-358 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2du7C1 C:359-437,C:479-549 Alpha-beta plaits O-phosphoseryl-tRNA synthetase C-terminal domain O-phosphoseryl-tRNA synthetase C-terminal domain
e2du7C3 C:438-478 SSHS domain SSHS domain in O-phosphoseryl-tRNA synthetase SSHS domain in O-phosphoseryl-tRNA synthetase
e2du7D1 D:11-358 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2du7D2 D:359-437,D:479-549 Alpha-beta plaits O-phosphoseryl-tRNA synthetase C-terminal domain O-phosphoseryl-tRNA synthetase C-terminal domain
e2du7D3 D:438-478 SSHS domain SSHS domain in O-phosphoseryl-tRNA synthetase SSHS domain in O-phosphoseryl-tRNA synthetase

Structural contacts of domain e2du7B1 of H-group "O-phosphoseryl-tRNA synthetase C-terminal domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2du7A1 B:x,y,z->A:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e2du7C2 B:X,Y,Z->C:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e2du7D1 B:-X+1/2,-Y+1/2,Z-1/2->D:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e2du7C1 B:-X+1/2,-Y+1/2,Z-1/2->C:x,y,z O-phosphoseryl-tRNA synthetase C-terminal domain Interaction Interface Pymol
e2du7C1 B:x,y,z->C:X-1/2,-Y+1/2,-Z O-phosphoseryl-tRNA synthetase C-terminal domain Interaction Interface Pymol
e2du7A1 B:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e2du7B1 B:x,y,z->B:-X,Y,-Z+1/2 O-phosphoseryl-tRNA synthetase C-terminal domain Interaction Interface Pymol
e2du7B1 B:-X,Y,-Z+1/2->B:x,y,z O-phosphoseryl-tRNA synthetase C-terminal domain Interaction Interface Pymol