ECOD: domain e2dupA1

Domain ID e2dupA1

A: beta sandwiches
X: jelly-roll
H: Concanavalin A-like
T: Concanavalin A-like lectins/glucanases
F: Lectin_leg-like

UID:	000324057
Type:	Automatic domain
Parent:	e1gv9A1
Range:	A:52-301
Ligands:	CA CL GOL
PDB:	2dup
PDB Description:	VESICULAR INTEGRAL-MEMBRANE PROTEIN VIP36
UniProt:	P49256
Hsap BLAST neighbor:	Q12907
Species:

Domains in the same chain:

Download Pymol

e2dupA1	A:52-301	jelly-roll	Concanavalin A-like	Concanavalin A-like lectins/glucanases

Domains in the same PDB:

e2dupA1	A:52-301	jelly-roll	Concanavalin A-like	Concanavalin A-like lectins/glucanases
e2dupB1	B:53-299	jelly-roll	Concanavalin A-like	Concanavalin A-like lectins/glucanases

Structural contacts of domain e2dupA1 of H-group "Concanavalin A-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2dupB1	A:X,Y,Z->B:x,y,z	Concanavalin A-like	Interaction Interface Pymol
e2dupA1	A:x,y,z->A:-X+3/2,Y-1/2,-Z+1	Concanavalin A-like	Interaction Interface Pymol
e2dupA1	A:-X+3/2,Y-1/2,-Z+1->A:x,y,z	Concanavalin A-like	Interaction Interface Pymol
e2dupB1	A:-X+2,Y,-Z+1->B:x,y,z	Concanavalin A-like	Interaction Interface Pymol
e2dupB1	A:x,y,z->B:X,Y-1,Z	Concanavalin A-like	Interaction Interface Pymol