| UID: | 000009601 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:8-274 |
| Ligands: | GTP MG |
| PDB: | 2dy1 |
| PDB Description: | ELONGATION FACTOR G |
| UniProt: | Q5SI76 |
| Hsap BLAST neighbor: | Q96RP9 |
| Species: | Thermus thermophilus |
Structure of domain e2dy1A5
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2dy1A5 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2dy1A2 | A:x,y,z->A:-X,Y,-Z | EF-G C-terminal domain-like | Interaction Interface Pymol |
| e2dy1A2 | A:-X,Y,-Z->A:x,y,z | EF-G C-terminal domain-like | Interaction Interface Pymol |
| e2dy1A5 | A:x,y,z->A:-X+1/2,Y-1/2,-Z | P-loop domains-related | Interaction Interface Pymol |
| e2dy1A5 | A:-X+1/2,Y-1/2,-Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e2dy1A1 | A:-X+1/2,Y-1/2,-Z->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e2dy1A4 | A:X-1/2,Y-1/2,Z->A:x,y,z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2dy1A3 | A:X-1/2,Y-1/2,Z->A:x,y,z | EF-G C-terminal domain-like | Interaction Interface Pymol |
| e2dy1A1 | A:X,Y-1,Z->A:x,y,z | RIFT-related | Interaction Interface Pymol |
