Domain ID e2dy9A1

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Nucleoside diphosphate kinases
  • T: Nucleoside diphosphate kinases
  • F: NDK
UID: 000065516
Type: Automatic domain
Parent: e3bbbA1
Range: A:6-156
Ligands: ADP CL
PDB: 2dy9
PDB Description: NUCLEOSIDE DIPHOSPHATE KINASE
UniProt: O58429
Hsap BLAST neighbor: P15531
Species:

Structure of domain e2dy9A1

Structural contacts of domain e2dy9A1 of H-group "Nucleoside diphosphate kinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2dy9B1 A:X,Y,Z->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e2dy9A1 A:x,y,z->A:-Y+1,X-Y,Z Nucleoside diphosphate kinases Interaction Interface Pymol
e2dy9A1 A:-Y+1,X-Y,Z->A:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e2dy9B1 A:X-Y+1,X,Z+1/2->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e2dy9B1 A:-Y+1,X-Y,Z->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e2dy9B1 A:x,y,z->B:X-Y+1,X,Z-1/2 Nucleoside diphosphate kinases Interaction Interface Pymol