| UID: | 000163768 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2f1lA1 |
| Range: | A:1-85 |
| PDB: | 2dyi |
| PDB Description: | Probable 16S rRNA-processing protein rimM |
| UniProt: | Q5SJH5 |
| Species: |
Structure of domain e2dyiA1
Domains in the same chain:
| e2dyiA1 | A:1-85 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e2dyiA2 | A:86-162 | SH3 | PRC-barrel domain | PRC-barrel domain |
Domains in the same PDB:
| e2dyiA1 | A:1-85 | cradle loop barrel | RIFT-related | Alanine racemase-C |
| e2dyiA2 | A:86-162 | SH3 | PRC-barrel domain | PRC-barrel domain |
Structural contacts of domain e2dyiA1 of H-group "RIFT-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2dyiA2 | A:x,y,z->A:-X,Y-1/2,-Z+1/2 | PRC-barrel domain | Interaction Interface Pymol |
| e2dyiA2 | A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | PRC-barrel domain | Interaction Interface Pymol |
| e2dyiA1 | A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | RIFT-related | Interaction Interface Pymol |
| e2dyiA1 | A:-X+1/2,-Y+1,Z-1/2->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e2dyiA2 | A:X-1,Y,Z->A:x,y,z | PRC-barrel domain | Interaction Interface Pymol |
| e2dyiA1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z | RIFT-related | Interaction Interface Pymol |
| e2dyiA1 | A:X-1/2,-Y+1/2,-Z->A:x,y,z | RIFT-related | Interaction Interface Pymol |
