Domain ID e2einF1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Cytochrome c oxidase Subunit F
  • F: COX5B
UID: 000089249
Type: Automatic domain
Parent: e1v54F1
Range: F:1-98
Ligands: PEK PGV ZN
PDB: 2ein
PDB Description: CYTOCHROME C OXIDASE POLYPEPTIDE VB
UniProt: P00428
Hsap BLAST neighbor: P10606
Species: Bos taurus

Structure of domain e2einF1

Domains in the same chain:

e2einF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F

Domains in the same PDB:

e2einA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e2einB2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e2einB1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e2einC1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e2einD1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e2einE1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e2einF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e2einG1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e2einH1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e2einI1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e2einJ1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e2einK1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e2einL1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e2einM1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e2einN1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e2einO2 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e2einO1 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e2einP1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e2einQ1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e2einR1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e2einS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e2einT1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e2einU1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e2einV1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e2einW1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e2einX1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e2einY1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e2einZ1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e2einF1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2einA1 F:x,y,z->A:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e2einC1 F:x,y,z->C:X,Y,Z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e2einE1 F:x,y,z->E:X,Y,Z Cytochrome c oxidase subunit E Interaction Interface Pymol
e2einJ1 F:X,Y,Z->J:x,y,z Mitochondrial cytochrome c oxidase subunit VIIa Interaction Interface Pymol
e2einD1 F:x,y,z->D:X,Y,Z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e2einS1 F:X,Y,Z->S:x,y,z Rubredoxin-related Interaction Interface Pymol
e2einD1 F:-X+1/2,-Y+3,Z-1/2->D:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e2einB1 F:-X+1/2,-Y+3,Z-1/2->B:x,y,z Cupredoxin-related Interaction Interface Pymol