Domain ID e2fd4A1

Download files:
  • A: few secondary structure elements
  • X: RING/U-box-like
  • H: RING/U-box-like
  • T: RING/U-box
  • F: AvrPtoB-E3_ubiq
UID: 001144163
Type: Manual and representative domain
Range: A:435A-553
PDB: 2fd4
PDB Description: avirulence protein AvrptoB
UniProt: Q8RSY1
Species: Pseudomonas syringae

Structure of domain e2fd4A1

Domains in the same chain:

e2fd4A1 A:435A-553 RING/U-box-like RING/U-box-like RING/U-box

Domains in the same PDB:

e2fd4A1 A:435A-553 RING/U-box-like RING/U-box-like RING/U-box

Structural contacts of domain e2fd4A1 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2fd4A1 A:x,y,z->A:X-Y,-Y,-Z+1/3 RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:X-Y,-Y,-Z+1/3->A:x,y,z RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:x,y,z->A:-Y+1,X-Y,Z-1/3 RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:-Y+1,X-Y,Z-1/3->A:x,y,z RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:x,y,z->A:Y,X-1,-Z RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:Y,X-1,-Z->A:x,y,z RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:x,y,z->A:-Y+1,X-Y,Z+2/3 RING/U-box-like Interaction Interface Pymol
e2fd4A1 A:-Y+1,X-Y,Z+2/3->A:x,y,z RING/U-box-like Interaction Interface Pymol