Domain ID e2fdiA1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: 2OG-FeII_Oxy_2
UID: 000001360
Type: Manual and representative domain
Range: A:15-214
Ligands: AKG FE2 SIN
PDB: 2fdi
PDB Description: Alkylated DNA repair protein alkB
UniProt: P05050
Hsap BLAST neighbor: Q13686
Species:

Structure of domain e2fdiA1

Structural contacts of domain e2fdiA1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2fdiA1 A:x,y,z->A:-Y,X,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:-Y,X,Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:x,y,z->A:X-1,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:X-1,Y,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:x,y,z->A:-Y+1,X,Z-1/4 Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:-Y+1,X,Z-1/4->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:x,y,z->A:X,Y-1,Z Double-stranded beta-helix Interaction Interface Pymol
e2fdiA1 A:X,Y-1,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol