ECOD: domain e2fpgB2

Domain ID e2fpgB2

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Succinyl-CoA synthetase domains
T: Succinyl-CoA synthetase domains
F: Ligase_CoA

UID:	000104566
Type:	Automatic domain
Parent:	e1eucB2
Range:	B:246-393
Ligands:	PO4
PDB:	2fpg
PDB Description:	Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial
UniProt:	P53590
Hsap BLAST neighbor:	Q96I99
Species:	Sus scrofa

Domain
In chain context
In PDB context

Structure of domain e2fpgB2

Domains in the same chain:

Download Pymol

e2fpgB1	B:1-245	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2fpgB2	B:246-393	Flavodoxin-like	Succinyl-CoA synthetase domains	Succinyl-CoA synthetase domains

Domains in the same PDB:

e2fpgA1	A:9-130	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e2fpgA2	A:131-306	Flavodoxin-like	Succinyl-CoA synthetase domains	Succinyl-CoA synthetase domains
e2fpgB1	B:1-245	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e2fpgB2	B:246-393	Flavodoxin-like	Succinyl-CoA synthetase domains	Succinyl-CoA synthetase domains

Structural contacts of domain e2fpgB2 of H-group "Succinyl-CoA synthetase domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2fpgA1	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2fpgA2	B:x,y,z->A:X,Y,Z	Succinyl-CoA synthetase domains	Interaction Interface Pymol
e2fpgA2	B:X-Y+1,X,Z-1/6->A:x,y,z	Succinyl-CoA synthetase domains	Interaction Interface Pymol