ECOD: domain e2frxD2

Domain ID e2frxD2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: S-adenosyl-L-methionine-dependent methyltransferases
F: Methyltr_RsmB-F,Methyltr_RsmF_N

UID:	001279520
Type:	Automatic domain
Parent:	e3m6uA1
Range:	D:7-320
PDB:	2frx
PDB Description:	Hypothetical protein yebU
UniProt:	P76273
Hsap BLAST neighbor:	P46087
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e2frxD2

Domains in the same chain:

Download Pymol

e2frxD2	D:7-320	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2frxD3	D:321-410	Cystatin-like	Pre-PUA domain	Pre-PUA domain
e2frxD4	D:411-474	cradle loop barrel	RIFT-related	PUA domain

Domains in the same PDB:

e2frxA2	A:7-320	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2frxA3	A:321-410	Cystatin-like	Pre-PUA domain	Pre-PUA domain
e2frxA4	A:411-474	cradle loop barrel	RIFT-related	PUA domain
e2frxB2	B:8-320	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2frxB3	B:321-410	Cystatin-like	Pre-PUA domain	Pre-PUA domain
e2frxB1	B:411-474	cradle loop barrel	RIFT-related	PUA domain
e2frxC2	C:8-320	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2frxC3	C:321-410	Cystatin-like	Pre-PUA domain	Pre-PUA domain
e2frxC1	C:411-474	cradle loop barrel	RIFT-related	PUA domain
e2frxD2	D:7-320	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e2frxD3	D:321-410	Cystatin-like	Pre-PUA domain	Pre-PUA domain
e2frxD4	D:411-474	cradle loop barrel	RIFT-related	PUA domain

Structural contacts of domain e2frxD2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2frxB2	D:X-1,Y,Z+1->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e2frxB3	D:X-1,Y,Z+1->B:x,y,z	Pre-PUA domain	Interaction Interface Pymol
e2frxC2	D:X-1,Y-1,Z->C:x,y,z	Rossmann-related	Interaction Interface Pymol
e2frxC3	D:X-1,Y-1,Z->C:x,y,z	Pre-PUA domain	Interaction Interface Pymol
e2frxB2	D:X-1,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e2frxA3	D:X,Y-1,Z+1->A:x,y,z	Pre-PUA domain	Interaction Interface Pymol