Domain ID e2fsiB4

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: SecA_DEAD
UID: 001410039
Type: Automatic domain
Parent: e1tf5A3
Range: B:11-228,B:369-415
Ligands: ADP
PDB: 2fsi
PDB Description: PREPROTEIN TRANSLOCASE SECA SUBUNIT
UniProt: P10408
Species: Escherichia coli

Structure of domain e2fsiB4

Domains in the same chain:

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e2fsiB4 B:11-228,B:369-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiB2 B:229-249,B:280-318,B:367-368 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e2fsiB1 B:416-619 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiB3 B:620-836 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Domains in the same PDB:

e2fsiA1 A:13-232,A:366-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiA2 A:416-619 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiA3 A:620-836 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA
e2fsiB4 B:11-228,B:369-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiB2 B:229-249,B:280-318,B:367-368 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e2fsiB1 B:416-619 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2fsiB3 B:620-836 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Structural contacts of domain e2fsiB4 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2fsiA2 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e2fsiB4 B:x,y,z->B:-X+1,Y-1/2,-Z P-loop domains-related Interaction Interface Pymol
e2fsiB3 B:-X+1,Y-1/2,-Z->B:x,y,z Helical scaffold and wing domains of SecA Interaction Interface Pymol
e2fsiB4 B:-X+1,Y-1/2,-Z->B:x,y,z P-loop domains-related Interaction Interface Pymol