ECOD: domain e2gahD1

Domain ID e2gahD1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: SoxD

UID:	000303721
Type:	Automatic domain
Parent:	e3ad7D1
Range:	D:1-91
Ligands:	ZN
PDB:	2gah
PDB Description:	HETEROTETRAMERIC SARCOSINE OXIDASE DELTA-SUBUNIT
UniProt:	Q3ZDQ9
Species:	Stenotrophomonas maltophilia

Domain
In chain context
In PDB context

Structure of domain e2gahD1

Domains in the same chain:

Download Pymol

e2gahD1	D:1-91	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e2gahA5	A:22-128	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2gahA8	A:129-481	Rossmann-like	Rossmann-related	Nucleotide-binding domain
e2gahA4	A:482-538	HTH	bacterioferritin-associated ferredoxin	bacterioferritin-associated ferredoxin
e2gahA7	A:557-724	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e2gahA6	A:725-856	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e2gahA3	A:860-965	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e2gahB1	B:3-242,B:332-405	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2gahB2	B:243-333	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2gahC1	C:9-198	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e2gahD1	D:1-91	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e2gahD1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gahB2	D:x,y,z->B:X,Y,Z	FAD-linked reductases-C	Interaction Interface Pymol
e2gahB1	D:x,y,z->B:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2gahB1	D:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2gahB1	D:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2gahA3	D:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e2gahC1	D:x,y,z->C:X,Y,Z	Aminomethyltransferase folate-binding domain	Interaction Interface Pymol
e2gahA5	D:x,y,z->A:X-1,Y,Z	Ubiquitin-related	Interaction Interface Pymol