| UID: | 001591417 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2bmoA2 |
| Range: | E:153-454 |
| Ligands: | BNL FE |
| PDB: | 2gbx |
| PDB Description: | Biphenyl 2,3-Dioxygenase Alpha Subunit |
| UniProt: | A2TC87 |
| Species: | Sphingobium yanoikuyae |
Structure of domain e2gbxE1
Domains in the same chain:
| e2gbxE3 | E:6-78,E:135-152 | ISP domain | ISP domain | ISP domain |
| e2gbxE2 | E:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2gbxE1 | E:153-454 | TBP-like | Bet v1-like | Bet v1-like |
Domains in the same PDB:
| e2gbxA4 | A:6-78,A:135-152 | ISP domain | ISP domain | ISP domain |
| e2gbxA1 | A:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2gbxA3 | A:153-454 | TBP-like | Bet v1-like | Bet v1-like |
| e2gbxB1 | B:5-174 | Cystatin-like | NTF2-like | NTF2-like |
| e2gbxC2 | C:6-78,C:135-152 | ISP domain | ISP domain | ISP domain |
| e2gbxC3 | C:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2gbxC1 | C:153-451 | TBP-like | Bet v1-like | Bet v1-like |
| e2gbxD1 | D:5-174 | Cystatin-like | NTF2-like | NTF2-like |
| e2gbxE3 | E:6-78,E:135-152 | ISP domain | ISP domain | ISP domain |
| e2gbxE2 | E:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2gbxE1 | E:153-454 | TBP-like | Bet v1-like | Bet v1-like |
| e2gbxF1 | F:5-174 | Cystatin-like | NTF2-like | NTF2-like |
Structural contacts of domain e2gbxE1 of H-group "Bet v1-like":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2gbxF1 | E:X,Y,Z->F:x,y,z | NTF2-like | Interaction Interface Pymol |
| e2gbxC1 | E:x,y,z->C:X,Y,Z | Bet v1-like | Interaction Interface Pymol |
| e2gbxA3 | E:x,y,z->A:X,Y,Z | Bet v1-like | Interaction Interface Pymol |
| e2gbxA4 | E:x,y,z->A:X,Y,Z | ISP domain | Interaction Interface Pymol |
| e2gbxA1 | E:x,y,z->A:X,Y,Z | Trm112p-like | Interaction Interface Pymol |
| e2gbxA3 | E:x,y,z->A:X-Y-1,-Y-1,-Z+2/3 | Bet v1-like | Interaction Interface Pymol |
| e2gbxA4 | E:x,y,z->A:X-Y-1,-Y-1,-Z+2/3 | ISP domain | Interaction Interface Pymol |
| e2gbxB1 | E:-Y,X-Y-1,Z+1/3->B:x,y,z | NTF2-like | Interaction Interface Pymol |
| e2gbxD1 | E:X,Y,Z->D:x,y,z | NTF2-like | Interaction Interface Pymol |
