| UID: | 000008690 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:119-374 |
| PDB: | 2gdq |
| PDB Description: | yitF |
| UniProt: | O06741 |
| Hsap BLAST neighbor: | Q7L5Y1 |
| Species: |
Structure of domain e2gdqA2
Domains in the same chain:
| e2gdqA1 | A:4-118 | Enolase-N/ribosomal protein | Enolase N-terminal domain-like | Enolase N-terminal domain-like |
| e2gdqA2 | A:119-374 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Domains in the same PDB:
Structural contacts of domain e2gdqA2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2gdqB2 | A:X,Y,Z->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2gdqB1 | A:X,Y,Z->B:x,y,z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e2gdqB2 | A:-X,Y,-Z->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2gdqB2 | A:-X,-Y+1,Z->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2gdqB1 | A:-X,-Y+1,Z->B:x,y,z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e2gdqA1 | A:x,y,z->A:-X,Y,-Z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e2gdqA2 | A:x,y,z->A:-X,Y,-Z | TIM barrels | Interaction Interface Pymol |
| e2gdqA1 | A:-X,Y,-Z->A:x,y,z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e2gdqA2 | A:-X,Y,-Z->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2gdqA2 | A:x,y,z->A:-X-1,Y,-Z | TIM barrels | Interaction Interface Pymol |
| e2gdqA2 | A:-X-1,Y,-Z->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2gdqB2 | A:x,y,z->B:X-1/2,-Y+1/2,-Z+1/2 | TIM barrels | Interaction Interface Pymol |
| e2gdqA2 | A:x,y,z->A:X,-Y,-Z | TIM barrels | Interaction Interface Pymol |
| e2gdqA2 | A:X,-Y,-Z->A:x,y,z | TIM barrels | Interaction Interface Pymol |
