| UID: | 001649729 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4izjA1 |
| Range: | A:559-707 |
| PDB: | 2gef |
| PDB Description: | PROTEASE VP4 |
| UniProt: | Q8AZM0 |
| Species: | Blotched snakehead virus |
Structure of domain e2gefA1
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e2gefA1 of H-group "Ribosomal protein S5 domain 2-like":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2gefB2 | A:X,Y,Z->B:x,y,z | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefB1 | A:X,Y,Z->B:x,y,z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefA1 | A:x,y,z->A:-X,-Y,Z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefA2 | A:x,y,z->A:-X,-Y,Z | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefA1 | A:-X,-Y,Z->A:x,y,z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefA2 | A:-X,-Y,Z->A:x,y,z | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefB2 | A:Z,X,Y->B:x,y,z | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefB1 | A:Z,X,Y->B:x,y,z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefB1 | A:x,y,z->B:-Z+1/2,X-1/2,-Y+1/2 | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefB2 | A:x,y,z->B:-Z+1/2,X-1/2,-Y+1/2 | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefA2 | A:x,y,z->A:Z,X,Y | C-terminal subdomain in Lon-related proteases catalytic domains | Interaction Interface Pymol |
| e2gefA1 | A:x,y,z->A:Z,X,Y | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
| e2gefA1 | A:Z,X,Y->A:x,y,z | Ribosomal protein S5 domain 2-like | Interaction Interface Pymol |
