Domain ID e2gjdA1

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  • A: a+b two layers
  • X: UBC-like
  • H: UBC-like
  • T: UBC-like
  • F: UQ_con
UID: 000302344
Type: Automatic domain
Parent: e1jatB1
Range: A:3-157
PDB: 2gjd
PDB Description: UBIQUITIN-CONJUGATING ENZYME E2-18 KDA
UniProt: P50623
Hsap BLAST neighbor: P63279
Species: Saccharomyces cerevisiae

Structure of domain e2gjdA1

Domains in the same chain:

e2gjdA1 A:3-157 UBC-like UBC-like UBC-like

Domains in the same PDB:

e2gjdA1 A:3-157 UBC-like UBC-like UBC-like
e2gjdB1 B:2-157 UBC-like UBC-like UBC-like
e2gjdC1 C:3-157 UBC-like UBC-like UBC-like
e2gjdD1 D:3-157 UBC-like UBC-like UBC-like

Structural contacts of domain e2gjdA1 of H-group "UBC-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gjdC1 A:X,Y,Z->C:x,y,z UBC-like Interaction Interface Pymol
e2gjdB1 A:x,y,z->B:-X+1,Y-1/2,-Z+1 UBC-like Interaction Interface Pymol
e2gjdD1 A:X,Y,Z->D:x,y,z UBC-like Interaction Interface Pymol
e2gjdB1 A:X,Y,Z->B:x,y,z UBC-like Interaction Interface Pymol
e2gjdB1 A:-X+1,Y-1/2,-Z+1->B:x,y,z UBC-like Interaction Interface Pymol
e2gjdB1 A:x,y,z->B:X-1,Y,Z UBC-like Interaction Interface Pymol
e2gjdC1 A:x,y,z->C:X-1,Y,Z UBC-like Interaction Interface Pymol
e2gjdA1 A:x,y,z->A:-X,Y-1/2,-Z+1 UBC-like Interaction Interface Pymol
e2gjdA1 A:-X,Y-1/2,-Z+1->A:x,y,z UBC-like Interaction Interface Pymol
e2gjdC1 A:x,y,z->C:-X+1,Y-1/2,-Z+1 UBC-like Interaction Interface Pymol