ECOD: domain e2gjkA3

Domain ID e2gjkA3

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: UPF1_1B_dom

UID:	001392057
Type:	Automatic domain
Parent:	e2wjvA4
Range:	A:323-414
PDB:	2gjk
PDB Description:	Regulator of nonsense transcripts 1
UniProt:	Q92900
Hsap BLAST neighbor:	Q92900
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2gjkA3

Domains in the same chain:

Download Pymol

e2gjkA1	A:291-322,A:415-699	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2gjkA3	A:323-414	cradle loop barrel	RIFT-related	Alanine racemase-C
e2gjkA2	A:700-908	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2gjkA1	A:291-322,A:415-699	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2gjkA3	A:323-414	cradle loop barrel	RIFT-related	Alanine racemase-C
e2gjkA2	A:700-908	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2gjkA3 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2gjkA3	A:x,y,z->A:Y,X,-Z+1	RIFT-related	Interaction Interface Pymol
e2gjkA3	A:Y,X,-Z+1->A:x,y,z	RIFT-related	Interaction Interface Pymol