Domain ID e2gjxD1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_20
UID: 000095289
Type: Automatic domain
Parent: e1nowA1
Range: D:167-523
Ligands: NAG SO4
PDB: 2gjx
PDB Description: Beta-hexosaminidase alpha chain
UniProt: P06865
Hsap BLAST neighbor: P06865
Species: Homo sapiens

Structure of domain e2gjxD1

Domains in the same chain:

e2gjxD2 D:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxD1 D:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e2gjxA2 A:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxA1 A:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxB2 B:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxB1 B:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxC2 C:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxC1 C:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxD2 D:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxD1 D:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxE2 E:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxE1 E:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxF2 F:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxF1 F:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxG2 G:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxG1 G:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gjxH2 H:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gjxH1 H:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e2gjxD1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gjxC1 D:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e2gjxB2 D:X,Y,Z->B:x,y,z beta-N-acetylhexosaminidase-like domain Interaction Interface Pymol
e2gjxA2 D:x,y,z->A:X,Y,Z beta-N-acetylhexosaminidase-like domain Interaction Interface Pymol
e2gjxC1 D:-X+1,Y,-Z->C:x,y,z TIM barrels Interaction Interface Pymol
e2gjxE1 D:-X+1,Y,-Z->E:x,y,z TIM barrels Interaction Interface Pymol
e2gjxF1 D:-X+1,Y,-Z+1->F:x,y,z TIM barrels Interaction Interface Pymol