Domain ID e2gk1C1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_20
UID: 000095267
Type: Automatic domain
Parent: e1nowA1
Range: C:167-523
Ligands: NGT
PDB: 2gk1
PDB Description: Beta-hexosaminidase subunit alpha
UniProt: P06865
Hsap BLAST neighbor: P06865
Species: Homo sapiens

Structure of domain e2gk1C1

Domains in the same chain:

e2gk1C2 C:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1C1 C:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e2gk1A2 A:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1A1 A:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1B2 B:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1B1 B:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1C2 C:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1C1 C:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1D2 D:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1D1 D:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1E2 E:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1E1 E:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1F2 F:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1F1 F:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1G2 G:23-166 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1G1 G:167-523 TIM beta/alpha-barrel TIM barrels TIM barrels
e2gk1H2 H:55-199 Zincin-like beta-N-acetylhexosaminidase-like domain beta-N-acetylhexosaminidase-like domain
e2gk1H1 H:200-552 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e2gk1C1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gk1D1 C:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol
e2gk1B1 C:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e2gk1B2 C:X,Y,Z->B:x,y,z beta-N-acetylhexosaminidase-like domain Interaction Interface Pymol
e2gk1A2 C:x,y,z->A:X,Y,Z beta-N-acetylhexosaminidase-like domain Interaction Interface Pymol
e2gk1G1 C:x,y,z->G:-X-1/2,Y-1/2,-Z TIM barrels Interaction Interface Pymol
e2gk1D1 C:-X,Y,-Z->D:x,y,z TIM barrels Interaction Interface Pymol
e2gk1G1 C:X-1/2,Y+1/2,Z->G:x,y,z TIM barrels Interaction Interface Pymol
e2gk1H1 C:x,y,z->H:-X-1/2,Y-1/2,-Z+1 TIM barrels Interaction Interface Pymol
e2gk1G2 C:X-1/2,Y-1/2,Z->G:x,y,z beta-N-acetylhexosaminidase-like domain Interaction Interface Pymol