Domain ID e2gt8A1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 000312126
Type: Automatic domain
Parent: e2ducA2
Range: A:3-186
PDB: 2gt8
PDB Description: 3C-like proteinase
UniProt: Q6T1E9
Species:

Structure of domain e2gt8A1

Structural contacts of domain e2gt8A1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gt8A2 A:x,y,z->A:-Y,-X,-Z+1/2 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A1 A:x,y,z->A:-Y,-X,-Z+1/2 RIFT-related Interaction Interface Pymol
e2gt8A2 A:-Y,-X,-Z+1/2->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A1 A:-Y,-X,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e2gt8A1 A:x,y,z->A:X-1/2,-Y-1/2,-Z+1/4 RIFT-related Interaction Interface Pymol
e2gt8A1 A:X-1/2,-Y-1/2,-Z+1/4->A:x,y,z RIFT-related Interaction Interface Pymol
e2gt8A2 A:X-1/2,-Y-1/2,-Z+1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:X-1,Y,Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:x,y,z->A:-Y+1/2,X+1/2,Z-1/4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:x,y,z->A:Y,X,-Z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:Y,X,-Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A2 A:-Y-1/2,X-1/2,Z-1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gt8A1 A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4 RIFT-related Interaction Interface Pymol
e2gt8A1 A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z RIFT-related Interaction Interface Pymol