Domain ID e2gtbA1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 000312128
Type: Automatic domain
Parent: e2ducA2
Range: A:2-186
Ligands: ACY AZP
PDB: 2gtb
PDB Description: 3C-LIKE PROTEINASE
UniProt: Q6T1E9
Species:

Structure of domain e2gtbA1

Structural contacts of domain e2gtbA1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gtbA2 A:x,y,z->A:Y,X,-Z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA1 A:x,y,z->A:Y,X,-Z RIFT-related Interaction Interface Pymol
e2gtbA2 A:Y,X,-Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA1 A:Y,X,-Z->A:x,y,z RIFT-related Interaction Interface Pymol
e2gtbA2 A:X-1/2,-Y-1/2,-Z+1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 RIFT-related Interaction Interface Pymol
e2gtbA1 A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z RIFT-related Interaction Interface Pymol
e2gtbA2 A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA2 A:X-1,Y,Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA2 A:-Y-1/2,X-1/2,Z-1/4->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e2gtbA2 A:x,y,z->A:-Y+1/2,X+1/2,Z-1/4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol