Domain ID e2gumB1

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  • A: beta barrels
  • X: PH domain-like
  • H: first barrel domain in viral glycoproteins
  • T: first barrel domain in viral glycoproteins
  • F: Glycoprot_B_PH1
UID: 000028993
Type: Automatic domain
Parent: e2gumA1
Range: B:153-364
PDB: 2gum
PDB Description: Glycoprotein B
UniProt: P06437
Species:

Structure of domain e2gumB1

Domains in the same chain:

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e2gumB3 B:111-138,B:499-724 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e2gumB2 B:139-152,B:365-461,B:491-498 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e2gumB1 B:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins

Domains in the same PDB:

e2gumA3 A:111-139,A:500-725 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e2gumA2 A:140-153,A:366-459,A:492-499 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e2gumA1 A:154-365 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins
e2gumB3 B:111-138,B:499-724 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e2gumB2 B:139-152,B:365-461,B:491-498 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e2gumB1 B:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins
e2gumC3 C:111-138,C:499-723 Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like Viral glycoprotein ectodomain-like
e2gumC2 C:139-152,C:365-459,C:491-498 PH domain-like second barrel domain in viral glycoproteins second barrel domain in viral glycoproteins
e2gumC1 C:153-364 PH domain-like first barrel domain in viral glycoproteins first barrel domain in viral glycoproteins

Structural contacts of domain e2gumB1 of H-group "first barrel domain in viral glycoproteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gumA3 B:x,y,z->A:X,Y,Z Viral glycoprotein ectodomain-like Interaction Interface Pymol
e2gumA1 B:x,y,z->A:X,Y,Z first barrel domain in viral glycoproteins Interaction Interface Pymol
e2gumC1 B:X,Y,Z->C:x,y,z first barrel domain in viral glycoproteins Interaction Interface Pymol
e2gumC3 B:X,Y,Z->C:x,y,z Viral glycoprotein ectodomain-like Interaction Interface Pymol
e2gumA3 B:x,y,z->A:X-1,Y+1,Z+1 Viral glycoprotein ectodomain-like Interaction Interface Pymol