Domain ID e2gyaR1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23
UID: 000306542
Type: Automatic domain
Parent: e3j6bP1
Range: R:7-98
PDB: 2gya
PDB Description:
Species:

Structure of domain e2gyaR1

Domains in the same chain:

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e2gyaR1 R:7-98 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e2gya24 2:5-67,2:159-226 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e2gya23 2:68-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e2gya31 3:2-48 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e2gya32 3:53-120 ClpS-like ClpS-related ClpS-related
e2gya51 5:2-48 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e2gya52 5:53-120 ClpS-like ClpS-related ClpS-related
e2gyaA4 A:38-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2gyaA3 A:125-264 SH3 SH3 SH3
e2gyaC1 C:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e2gyaD1 D:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e2gyaE2 E:5-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2gyaE1 E:82-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e2gyaF2 F:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e2gyaG2 G:2-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e2gyaG1 G:73-138 HTH HTH Ribosomal protein L11, C-terminal domain
e2gyaH1 H:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e2gyaI1 I:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e2gyaL1 L:3-116 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e2gyaQ1 Q:5-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e2gyaR1 R:7-98 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e2gyaS1 S:3-101 SH3 SH3 SH3
e2gyaT1 T:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e2gyaU1 U:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e2gyaW1 W:1-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e2gyaX1 X:3-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e2gyaR1 of H-group "Ribosomal proteins S24e, L23 and L15e":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2gyaW1 R:x,y,z->W:X,Y,Z Ribosomal protein L29 (L29p) Interaction Interface Pymol