Domain ID e2hhvA3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_A
UID: 000005354
Type: Manual and representative domain
Range: A:644-668,A:793-876
Ligands: MG SO4
PDB: 2hhv
PDB Description: DNA Polymerase I
UniProt: Q5KWC1
Hsap BLAST neighbor: O75417
Species: Geobacillus stearothermophilus

Structure of domain e2hhvA3

Structural contacts of domain e2hhvA3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2hhvA1 A:-X,Y-1/2,-Z+1/2->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e2hhvA4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e2hhvA2 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e2hhvA1 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol