ECOD: domain e2hjdB1

Domain ID e2hjdB1

A: alpha bundles
X: Long alpha-hairpin
H: Transcriptional repressor TraM
T: Transcriptional repressor TraM
F: Prok-TraM

UID:	000309021
Type:	Automatic domain
Parent:	e1rfyA1
Range:	B:12-100
PDB:	2hjd
PDB Description:	QUORUM-SENSING ANTIACTIVATOR
UniProt:	Q20HX4
Species:	Agrobacterium tumefaciens

Domains in the same chain:

Download Pymol

e2hjdB1	B:12-100	Long alpha-hairpin	Transcriptional repressor TraM	Transcriptional repressor TraM

Domains in the same PDB:

e2hjdA1	A:12-100	Long alpha-hairpin	Transcriptional repressor TraM	Transcriptional repressor TraM
e2hjdB1	B:12-100	Long alpha-hairpin	Transcriptional repressor TraM	Transcriptional repressor TraM
e2hjdC1	C:12-100	Long alpha-hairpin	Transcriptional repressor TraM	Transcriptional repressor TraM
e2hjdD1	D:12-101	Long alpha-hairpin	Transcriptional repressor TraM	Transcriptional repressor TraM

Structural contacts of domain e2hjdB1 of H-group "Transcriptional repressor TraM":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2hjdA1	B:x,y,z->A:X,Y,Z	Transcriptional repressor TraM	Interaction Interface Pymol
e2hjdA1	B:x,y,z->A:-Y+1,X-1,Z-1/4	Transcriptional repressor TraM	Interaction Interface Pymol
e2hjdD1	B:x,y,z->D:-X+2,-Y-1,Z-3/2	Transcriptional repressor TraM	Interaction Interface Pymol
e2hjdC1	B:x,y,z->C:-X+2,-Y-1,Z-3/2	Transcriptional repressor TraM	Interaction Interface Pymol
e2hjdB1	B:x,y,z->B:-Y+1,X-1,Z-1/4	Transcriptional repressor TraM	Interaction Interface Pymol
e2hjdB1	B:-Y+1,X-1,Z-1/4->B:x,y,z	Transcriptional repressor TraM	Interaction Interface Pymol