| UID: | 001270816 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1b5qA2 |
| Range: | A:274-639,A:747-832 |
| Ligands: | FAD |
| PDB: | 2hko |
| PDB Description: | Lysine-specific histone demethylase 1 |
| UniProt: | O60341 |
| Hsap BLAST neighbor: | O60341 |
| Species: | Homo sapiens |
Structure of domain e2hkoA5
Domains in the same chain:
| e2hkoA3 | A:173-273 | HTH | HTH | tri-helical |
| e2hkoA5 | A:274-639,A:747-832 | Rossmann-like | Rossmann-related | FAD/NAD(P)-binding domain |
| e2hkoA4 | A:640-746 | FAD-linked reductases, C-terminal domain-like | FAD-linked reductases-C | FAD-linked reductases-C |
Domains in the same PDB:
| e2hkoA3 | A:173-273 | HTH | HTH | tri-helical |
| e2hkoA5 | A:274-639,A:747-832 | Rossmann-like | Rossmann-related | FAD/NAD(P)-binding domain |
| e2hkoA4 | A:640-746 | FAD-linked reductases, C-terminal domain-like | FAD-linked reductases-C | FAD-linked reductases-C |
Structural contacts of domain e2hkoA5 of H-group "Rossmann-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2hkoA4 | A:x,y,z->A:Y,X,-Z+4/3 | FAD-linked reductases-C | Interaction Interface Pymol |
| e2hkoA5 | A:x,y,z->A:Y,X,-Z+4/3 | Rossmann-related | Interaction Interface Pymol |
| e2hkoA4 | A:Y,X,-Z+4/3->A:x,y,z | FAD-linked reductases-C | Interaction Interface Pymol |
| e2hkoA5 | A:Y,X,-Z+4/3->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e2hkoA5 | A:x,y,z->A:Y,X,-Z+1/3 | Rossmann-related | Interaction Interface Pymol |
| e2hkoA5 | A:Y,X,-Z+1/3->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e2hkoA5 | A:x,y,z->A:-X+1,-Y+1,Z-1/2 | Rossmann-related | Interaction Interface Pymol |
| e2hkoA3 | A:x,y,z->A:-X+1,-Y+1,Z-1/2 | HTH | Interaction Interface Pymol |
| e2hkoA5 | A:-X+1,-Y+1,Z-1/2->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
| e2hkoA5 | A:x,y,z->A:-Y+1,-X+1,-Z-1/6 | Rossmann-related | Interaction Interface Pymol |
| e2hkoA5 | A:-Y+1,-X+1,-Z-1/6->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
