ECOD: domain e2hpiA2

Domain ID e2hpiA2

FASTA
Coordinates
Conservation
Pymol

A: a+b three layers
X: Nucleotidyltransferase-like
H: Nucleotidyltransferase
T: Nucleotidyltransferase
F: DNA_pol3_alpha

UID:	001117589
Type:	Manual and representative domain
Range:	A:286-622
Ligands:	MG
PDB:	2hpi
PDB Description:	DNA polymerase III alpha subunit
UniProt:	Q9XDH5
Species:	Thermus aquaticus

Domains in the same chain:

Download Pymol

Domains in the same PDB:

Structural contacts of domain e2hpiA2 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2hpiA1	A:x,y,z->A:X,-Y,-Z	TIM barrels	Interaction Interface Pymol
e2hpiA1	A:X,-Y,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol
e2hpiA4	A:-X-1/2,-Y-1/2,Z-1/2->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol

e2hpiA1	A:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2hpiA2	A:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e2hpiA3	A:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e2hpiA4	A:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2hpiA5	A:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2hpiA6	A:1127-1205	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain

e2hpiA1	A:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2hpiA2	A:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e2hpiA3	A:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e2hpiA4	A:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2hpiA5	A:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2hpiA6	A:1127-1205	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain