Domain ID e2hrdB1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000324080
Type: Automatic domain
Parent: e3pnpA1
Range: B:6002-6253
Ligands: 1PE GOL PO4 TDR
PDB: 2hrd
PDB Description: URIDINE PHOSPHORYLASE
UniProt: P0A1F6
Hsap BLAST neighbor: O95045
Species:

Structure of domain e2hrdB1

Structural contacts of domain e2hrdB1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2hrdD1 B:X,Y,Z->D:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdF1 B:X,Y,Z->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdE1 B:x,y,z->E:-X+1/2,-Y,Z-1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdE1 B:x,y,z->E:-X-1/2,-Y,Z-1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdA1 B:x,y,z->A:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdC1 B:X,Y,Z->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdD1 B:x,y,z->D:-X,Y-1/2,-Z-1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e2hrdA1 B:X-1/2,-Y-1/2,-Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol