ECOD: domain e2hyiC2

Domain ID e2hyiC2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: DEAD

UID:	000102635
Type:	Automatic domain
Parent:	e1hv8A1
Range:	C:24-241
Ligands:	ANP MG
PDB:	2hyi
PDB Description:	Probable ATP-dependent RNA helicase DDX48
UniProt:	P38919
Hsap BLAST neighbor:	P38919
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2hyiC2

Domains in the same chain:

Download Pymol

e2hyiC2	C:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2hyiC1	C:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2hyiA1	A:3-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2hyiB1	B:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e2hyiC2	C:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2hyiC1	C:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2hyiG1	G:3-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2hyiH1	H:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e2hyiI2	I:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2hyiI1	I:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2hyiC2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2hyiA1	C:x,y,z->A:X,Y,Z	Mago nashi protein	Interaction Interface Pymol
e2hyiI2	C:X,Y,Z->I:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2hyiG1	C:x,y,z->G:-X-1/2,Y-1/2,-Z+1	Mago nashi protein	Interaction Interface Pymol
e2hyiB1	C:x,y,z->B:-X-1/2,Y-1/2,-Z	RNA-binding domain, RBD	Interaction Interface Pymol