Domain ID e2i2xD2

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  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: Class I glutamine amidotransferase-like
  • T: CheY-like
  • F: B12-binding
UID: 001342866
Type: Automatic domain
Parent: e3bulA3
Range: D:118-258
Ligands: B13
PDB: 2i2x
PDB Description: Methyltransferase 1
UniProt: Q46EH4
Hsap BLAST neighbor: Q99707
Species: Methanosarcina barkeri

Structure of domain e2i2xD2

Domains in the same chain:

e2i2xD1 D:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xD2 D:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like

Domains in the same PDB:

e2i2xA1 A:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xB2 B:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xB1 B:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xC1 C:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xD1 D:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xD2 D:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xE1 E:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xF1 F:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xF2 F:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xG1 G:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xH1 H:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xH2 H:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xI1 I:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xJ1 J:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xJ2 J:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xK1 K:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xL1 L:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xL2 L:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xM1 M:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xN1 N:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xN2 N:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2i2xO1 O:3-461 TIM beta/alpha-barrel TIM barrels TIM barrels
e2i2xP1 P:1-119 Methionine synthase domain-like Methionine synthase domain-like Methionine synthase domain-like
e2i2xP2 P:118-258 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like

Structural contacts of domain e2i2xD2 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2i2xC1 D:x,y,z->C:X,Y,Z TIM barrels Interaction Interface Pymol
e2i2xA1 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2i2xJ1 D:-X,Y-1/2,-Z+1->J:x,y,z Methionine synthase domain-like Interaction Interface Pymol