ECOD: domain e2i2xD2

Domain ID e2i2xD2

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: CheY-like
F: B12-binding

UID:	001342866
Type:	Automatic domain
Parent:	e3bulA3
Range:	D:118-258
Ligands:	B13
PDB:	2i2x
PDB Description:	Methyltransferase 1
UniProt:	Q46EH4
Hsap BLAST neighbor:	Q99707
Species:	Methanosarcina barkeri

Domains in the same chain:

Download Pymol

e2i2xD1	D:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xD2	D:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like

Domains in the same PDB:

e2i2xA1	A:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xB2	B:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xB1	B:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xC1	C:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xD1	D:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xD2	D:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xE1	E:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xF1	F:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xF2	F:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xG1	G:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xH1	H:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xH2	H:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xI1	I:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xJ1	J:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xJ2	J:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xK1	K:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xL1	L:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xL2	L:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xM1	M:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xN1	N:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xN2	N:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e2i2xO1	O:3-461	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2i2xP1	P:1-119	Methionine synthase domain-like	Methionine synthase domain-like	Methionine synthase domain-like
e2i2xP2	P:118-258	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like

Structural contacts of domain e2i2xD2 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2i2xC1	D:x,y,z->C:X,Y,Z	TIM barrels	Interaction Interface Pymol
e2i2xA1	D:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e2i2xJ1	D:-X,Y-1/2,-Z+1->J:x,y,z	Methionine synthase domain-like	Interaction Interface Pymol