ECOD: domain e2i4mB2

Domain ID e2i4mB2

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	000308560
Type:	Automatic domain
Parent:	e1kmmA2
Range:	B:346-438
PDB:	2i4m
PDB Description:	PROLINE-TRNA LIGASE
UniProt:	Q6N5P6
Species:	Rhodopseudomonas palustris

Domain
In chain context
In PDB context

Structure of domain e2i4mB2

Domains in the same chain:

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e2i4mB1	B:-2-344	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2i4mB2	B:346-438	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e2i4mA1	A:-2-344	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2i4mA2	A:346-436	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e2i4mB1	B:-2-344	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2i4mB2	B:346-438	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e2i4mC1	C:-2-344	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2i4mC2	C:346-438	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e2i4mB2 of H-group "Anticodon-binding domain of Class II aaRS":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2i4mC1	B:X,-Y+1,-Z->C:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol