Domain ID e2i5yG2

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  • A: a+b two layers
  • X: gp120 inner domain
  • H: gp120 inner domain
  • T: gp120 inner domain
  • F: GP120
UID: 001829516
Type: Automatic domain
Parent: e2nxyA3
Range: G:82-255,G:474-492
Ligands: NAG
DrugDomain: DB04639
PDB: 2i5y
PDB Description: Exterior membrane glycoprotein(GP120)
UniProt: P35961
Species: Human immunodeficiency virus

Structure of domain e2i5yG2

Domains in the same chain:

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e2i5yG2 G:82-255,G:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2i5yG1 G:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e2i5yG2 G:82-255,G:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2i5yG1 G:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2i5yH1 H:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yH2 H:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yL1 L:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yL2 L:108-212 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yM1 M:1-27 omega toxin-like omega toxin-related Scorpion toxin-like
e2i5yP1 P:82-255,P:474-492 gp120 inner domain gp120 inner domain gp120 inner domain
e2i5yP2 P:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e2i5yQ1 Q:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yQ2 Q:108-212 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yR1 R:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yR2 R:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2i5yS1 S:1-27 omega toxin-like omega toxin-related Scorpion toxin-like

Structural contacts of domain e2i5yG2 of H-group "gp120 inner domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2i5yH1 G:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2i5yG1 G:X-1,Y,Z->G:x,y,z Ribosomal protein L31e/gp120 outer domain Interaction Interface Pymol
e2i5yH1 G:X-1,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol