ECOD: domain e2i6dA1

Domain ID e2i6dA1

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: SpoU_methylase

UID:	000162167
Type:	Automatic domain
Parent:	e1mxiA1
Range:	A:89-254
Ligands:	ACY
PDB:	2i6d
PDB Description:	RNA METHYLTRANSFERASE, TRMH FAMILY
UniProt:	Q7MW92
Hsap BLAST neighbor:	Q6IN84
Species:

Domains in the same chain:

Download Pymol

e2i6dA3	A:0-88	Bacillus chorismate mutase-like	L30e-like	L30e-like
e2i6dA1	A:89-254	alpha/beta knot	alpha/beta knot	alpha/beta knot

Domains in the same PDB:

e2i6dA3	A:0-88	Bacillus chorismate mutase-like	L30e-like	L30e-like
e2i6dA1	A:89-254	alpha/beta knot	alpha/beta knot	alpha/beta knot

Structural contacts of domain e2i6dA1 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2i6dA1	A:x,y,z->A:-X+1,Y,-Z+1/2	alpha/beta knot	Interaction Interface Pymol
e2i6dA1	A:-X+1,Y,-Z+1/2->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e2i6dA1	A:x,y,z->A:X,-Y,-Z+1	alpha/beta knot	Interaction Interface Pymol
e2i6dA1	A:X,-Y,-Z+1->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e2i6dA3	A:X-1/2,Y+1/2,Z->A:x,y,z	L30e-like	Interaction Interface Pymol
e2i6dA3	A:X-1,Y,Z->A:x,y,z	L30e-like	Interaction Interface Pymol
e2i6dA1	A:x,y,z->A:-X+2,Y,-Z+1/2	alpha/beta knot	Interaction Interface Pymol
e2i6dA1	A:-X+2,Y,-Z+1/2->A:x,y,z	alpha/beta knot	Interaction Interface Pymol