ECOD: domain e2idbB2

Domain ID e2idbB2

A: a+b two layers
X: Alpha-lytic protease prodomain-like
H: UbiD C-terminal domain-like
T: UbiD C-terminal domain-like
F: UbiD_C

UID:	000070801
Type:	Automatic domain
Parent:	e2idbA2
Range:	B:326-491
Ligands:	1PE
PDB:	2idb
PDB Description:	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
UniProt:	P0AAB4
Species:

Domain
In chain context
In PDB context

Structure of domain e2idbB2

Domains in the same chain:

Download Pymol

e2idbB3	B:7-93	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain
e2idbB1	B:120-325	cradle loop barrel	RIFT-related	FMN-binding split barrel
e2idbB2	B:326-491	Alpha-lytic protease prodomain-like	UbiD C-terminal domain-like	UbiD C-terminal domain-like

Domains in the same PDB:

e2idbA4	A:6-107	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain
e2idbA3	A:120-325	cradle loop barrel	RIFT-related	FMN-binding split barrel
e2idbA2	A:326-491	Alpha-lytic protease prodomain-like	UbiD C-terminal domain-like	UbiD C-terminal domain-like
e2idbB3	B:7-93	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain
e2idbB1	B:120-325	cradle loop barrel	RIFT-related	FMN-binding split barrel
e2idbB2	B:326-491	Alpha-lytic protease prodomain-like	UbiD C-terminal domain-like	UbiD C-terminal domain-like
e2idbC3	C:5-96	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain	N-terminal subdomain in UbiD middle domain
e2idbC1	C:123-325	cradle loop barrel	RIFT-related	FMN-binding split barrel
e2idbC2	C:326-491	Alpha-lytic protease prodomain-like	UbiD C-terminal domain-like	UbiD C-terminal domain-like

Structural contacts of domain e2idbB2 of H-group "UbiD C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2idbA2	B:x,y,z->A:X,Y,Z	UbiD C-terminal domain-like	Interaction Interface Pymol
e2idbA3	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e2idbA4	B:x,y,z->A:X,Y,Z	N-terminal subdomain in UbiD middle domain	Interaction Interface Pymol
e2idbC2	B:x,y,z->C:X,Y,Z	UbiD C-terminal domain-like	Interaction Interface Pymol