| UID: | 001177558 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1vioA1 |
| Range: | A:73-325 |
| Ligands: | BCT CL |
| PDB: | 2ist |
| PDB Description: | Ribosomal large subunit pseudouridine synthase D |
| UniProt: | P33643 |
| Hsap BLAST neighbor: | Q8IZ73 |
| Species: | Escherichia coli |
Structure of domain e2istA1
Domains in the same chain:
| e2istA2 | A:2-72 | beta-Grasp | Ubiquitin-related | Alpha-L RNA-binding motif |
| e2istA1 | A:73-325 | Alpha-beta plaits | Pseudouridine synthase | Pseudouridine synthase |
Domains in the same PDB:
| e2istA2 | A:2-72 | beta-Grasp | Ubiquitin-related | Alpha-L RNA-binding motif |
| e2istA1 | A:73-325 | Alpha-beta plaits | Pseudouridine synthase | Pseudouridine synthase |
Structural contacts of domain e2istA1 of H-group "Pseudouridine synthase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2istA1 | A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 | Pseudouridine synthase | Interaction Interface Pymol |
| e2istA1 | A:-X+1/2,-Y+1,Z-1/2->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
| e2istA2 | A:-X+1/2,-Y+1,Z-1/2->A:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e2istA2 | A:x,y,z->A:X-1/2,-Y+3/2,-Z | Ubiquitin-related | Interaction Interface Pymol |
| e2istA1 | A:x,y,z->A:X-1/2,-Y+3/2,-Z | Pseudouridine synthase | Interaction Interface Pymol |
| e2istA2 | A:X-1/2,-Y+3/2,-Z->A:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e2istA1 | A:X-1/2,-Y+3/2,-Z->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
| e2istA1 | A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | Pseudouridine synthase | Interaction Interface Pymol |
| e2istA1 | A:-X+1,Y-1/2,-Z+1/2->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
