ECOD: domain e2ix1A4

Domain ID e2ix1A4

A: beta barrels
X: OB-fold
H: RNB domain-like
T: RNB domain-like
F: RNB

UID:	000025020
Type:	Automatic domain
Parent:	e2vnuD4
Range:	A:173-557
Ligands:	MG
PDB:	2ix1
PDB Description:	EXORIBONUCLEASE 2
UniProt:	P30850
Hsap BLAST neighbor:	Q9Y2L1
Species:	Escherichia coli

Domains in the same chain:

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e2ix1A2	A:4-82	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ix1A1	A:83-172	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ix1A4	A:173-557	OB-fold	RNB domain-like	RNB domain-like
e2ix1A3	A:558-643	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e2ix1A2	A:4-82	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ix1A1	A:83-172	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2ix1A4	A:173-557	OB-fold	RNB domain-like	RNB domain-like
e2ix1A3	A:558-643	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e2ix1A4 of H-group "RNB domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ix1A2	A:X-Y+1,X+1,Z-1/6->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2ix1A1	A:x,y,z->A:X-Y,X,Z-1/6	Nucleic acid-binding proteins	Interaction Interface Pymol
e2ix1A4	A:x,y,z->A:X-Y,X,Z-1/6	RNB domain-like	Interaction Interface Pymol
e2ix1A4	A:X-Y,X,Z-1/6->A:x,y,z	RNB domain-like	Interaction Interface Pymol
e2ix1A3	A:X-Y,X,Z-1/6->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2ix1A2	A:x,y,z->A:X-1,Y-1,Z	Nucleic acid-binding proteins	Interaction Interface Pymol