ECOD: domain e2iy5B6

Domain ID e2iy5B6

A: a+b three layers
X: Class II aaRS and biotin synthetases
H: Class II aaRS and biotin synthetases
T: Class II aaRS and biotin synthetases
F: tRNA_synthFbeta

UID:	000079541
Type:	Automatic domain
Parent:	e1jjcB6
Range:	B:475-681
PDB:	2iy5
PDB Description:	PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN
UniProt:	P27002
Hsap BLAST neighbor:	Q9NSD9
Species:

Domain
In chain context
In PDB context

Structure of domain e2iy5B6

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e2iy5A1	A:15-84	Long alpha-hairpin	tRNA-binding arm	tRNA-binding arm
e2iy5A2	A:85-350	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2iy5B3	B:1-38,B:152-190	HTH	HTH	Putative DNA-binding domain
e2iy5B1	B:39-151	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2iy5B2	B:191-399	PheT/TilS domain	PheT/TilS domain	PheT/TilS domain
e2iy5B4	B:400-474	HTH	HTH	Putative DNA-binding domain
e2iy5B6	B:475-681	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2iy5B5	B:682-781	Alpha-beta plaits	Anticodon-binding domain of PheRS	Anticodon-binding domain of PheRS

Structural contacts of domain e2iy5B6 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2iy5A2	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2iy5A1	B:x,y,z->A:Y,X,-Z	tRNA-binding arm	Interaction Interface Pymol
e2iy5A2	B:x,y,z->A:Y,X,-Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2iy5B4	B:x,y,z->B:Y,X,-Z	HTH	Interaction Interface Pymol
e2iy5B6	B:x,y,z->B:Y,X,-Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2iy5B4	B:Y,X,-Z->B:x,y,z	HTH	Interaction Interface Pymol
e2iy5B6	B:Y,X,-Z->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol