Domain ID e2j0fB2

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Pyrimidine nucleoside phosphorylase C-terminal domain
  • F: PYNP_C
UID: 000308085
Type: Automatic domain
Parent: e2tptA2
Range: B:374-479
PDB: 2j0f
PDB Description: THYMIDINE PHOSPHORYLASE
UniProt: P19971
Hsap BLAST neighbor: P19971
Species: Homo sapiens

Structure of domain e2j0fB2

Domains in the same chain:

e2j0fB1 B:34-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2j0fB3 B:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2j0fB2 B:374-479 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e2j0fA1 A:34-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2j0fA3 A:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2j0fA2 A:374-479 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e2j0fB1 B:34-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2j0fB3 B:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2j0fB2 B:374-479 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e2j0fC1 C:34-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2j0fC3 C:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2j0fC2 C:374-479 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e2j0fD1 D:34-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2j0fD3 D:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2j0fD2 D:374-479 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e2j0fB2 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2j0fD1 B:X,Y,Z->D:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol
e2j0fB2 B:x,y,z->B:-X,Y-1/2,-Z-1 alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2j0fB3 B:x,y,z->B:-X,Y-1/2,-Z-1 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e2j0fB3 B:-X,Y-1/2,-Z-1->B:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e2j0fB2 B:-X,Y-1/2,-Z-1->B:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2j0fA3 B:x,y,z->A:X,Y,Z-1 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol