ECOD: domain e2j0sA1

Domain ID e2j0sA1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Helicase_C

UID:	000102625
Type:	Automatic domain
Parent:	e1hv8A2
Range:	A:251-411
Ligands:	ANP
PDB:	2j0s
PDB Description:	ATP-DEPENDENT RNA HELICASE DDX48
UniProt:	P38919
Hsap BLAST neighbor:	P38919
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2j0sA1

Domains in the same chain:

Download Pymol

e2j0sA2	A:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0sA1	A:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2j0sA2	A:24-241	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0sA1	A:251-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j0sC1	C:4-143	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2j0sD1	D:66-153	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e2j0sA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j0sC1	A:X,Y,Z->C:x,y,z	Mago nashi protein	Interaction Interface Pymol
e2j0sC1	A:-Y+1,X-Y+1,Z+1/3->C:x,y,z	Mago nashi protein	Interaction Interface Pymol
e2j0sD1	A:X,Y,Z->D:x,y,z	RNA-binding domain, RBD	Interaction Interface Pymol
e2j0sA2	A:x,y,z->A:X-Y,X,Z-1/3	P-loop domains-related	Interaction Interface Pymol