ECOD: domain e2j37W1

Domain ID e2j37W1

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: SRP_SPB

UID:	001758342
Type:	Automatic domain
Parent:	e1hq1A1
Range:	W:297-488
PDB:	2j37
PDB Description:	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN (SRP54)
UniProt:	P61010
Hsap BLAST neighbor:	P61011
Species:	Canis sp.

Domain
In chain context
In PDB context

Structure of domain e2j37W1

Domains in the same chain:

Download Pymol

e2j37W3	W:8-89	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e2j37W2	W:90-296	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j37W1	W:297-488	HTH	HTH	tri-helical

Domains in the same PDB:

e2j3741	4:69-149	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e2j3751	5:4-67	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e2j3761	6:17-97	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e2j37B1	B:14-118	HTH	HTH	Putative DNA-binding domain
e2j37W3	W:8-89	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e2j37W2	W:90-296	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2j37W1	W:297-488	HTH	HTH	tri-helical

Structural contacts of domain e2j37W1 of H-group "HTH":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j37B1	W:X,Y,Z->B:x,y,z	HTH	Interaction Interface Pymol