ECOD: domain e2j3lA3

Domain ID e2j3lA3

A: a+b complex topology
X: YbaK/ProRS associated domain
H: YbaK/ProRS associated domain
T: YbaK/ProRS associated domain
F: tRNA_edit

UID:	001633797
Type:	Automatic domain
Parent:	e1wdvA1
Range:	A:251-372
Ligands:	SO4
PDB:	2j3l
PDB Description:	PROLYL-TRNA SYNTHETASE
UniProt:	Q831W7
Species:	Enterococcus faecalis

Domain
In chain context
In PDB context

Structure of domain e2j3lA3

Domains in the same chain:

Download Pymol

e2j3lA1	A:1-250,A:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3lA3	A:251-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3lA2	A:470-565	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e2j3lA1	A:1-250,A:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3lA3	A:251-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3lA2	A:470-565	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e2j3lB1	B:1-251,B:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3lB3	B:252-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3lB2	B:470-570	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e2j3lA3 of H-group "YbaK/ProRS associated domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j3lA1	A:x,y,z->A:Y-1,X+1,-Z+1	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2j3lA1	A:Y-1,X+1,-Z+1->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2j3lB1	A:-Y+3/2,X+1/2,Z+1/4->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2j3lB1	A:x,y,z->B:X-1/2,-Y+3/2,-Z+3/4	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2j3lB3	A:x,y,z->B:X-1/2,-Y+3/2,-Z+3/4	YbaK/ProRS associated domain	Interaction Interface Pymol
e2j3lB1	A:Y-1,X+1,-Z+1->B:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol