ECOD: domain e2j3mA2

Domain ID e2j3mA2

A: a/b three-layered sandwiches
X: Anticodon-binding domain of Class II aaRS
H: Anticodon-binding domain of Class II aaRS
T: Anticodon-binding domain of Class II aaRS
F: HGTP_anticodon

UID:	001665910
Type:	Automatic domain
Parent:	e2i4nB2
Range:	A:470-565
PDB:	2j3m
PDB Description:	PROLYL-TRNA SYNTHETASE
UniProt:	Q831W7
Species:	Enterococcus faecalis

Domain
In chain context
In PDB context

Structure of domain e2j3mA2

Domains in the same chain:

Download Pymol

e2j3mA1	A:1-250,A:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3mA3	A:251-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3mA2	A:470-565	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Domains in the same PDB:

e2j3mA1	A:1-250,A:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3mA3	A:251-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3mA2	A:470-565	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e2j3mB1	B:1-250,B:373-469	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2j3mB3	B:251-372	YbaK/ProRS associated domain	YbaK/ProRS associated domain	YbaK/ProRS associated domain
e2j3mB2	B:470-565	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS

Structural contacts of domain e2j3mA2 of H-group "Anticodon-binding domain of Class II aaRS":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j3mA3	A:x,y,z->A:-X+1,Y-1/2,-Z	YbaK/ProRS associated domain	Interaction Interface Pymol
e2j3mB2	A:x,y,z->B:-X+1,Y-1/2,-Z+1	Anticodon-binding domain of Class II aaRS	Interaction Interface Pymol
e2j3mB3	A:x,y,z->B:X,Y-1,Z	YbaK/ProRS associated domain	Interaction Interface Pymol