ECOD: domain e2j9dD1

Domain ID e2j9dD1

A: a+b two layers
X: Alpha-beta plaits
H: GlnB-like
T: GlnB-like
F: P-II

UID:	000313104
Type:	Automatic domain
Parent:	e1vfjA1
Range:	D:-1-115
Ligands:	ACT
PDB:	2j9d
PDB Description:	HYPOTHETICAL NITROGEN REGULATORY PII-LIKE PROTEIN MJ0059
UniProt:	Q60381
Species:	Methanocaldococcus jannaschii

Domain
In chain context
In PDB context

Structure of domain e2j9dD1

Domains in the same chain:

Download Pymol

e2j9dD1	D:-1-115	Alpha-beta plaits	GlnB-like	GlnB-like

Domains in the same PDB:

e2j9dA1	A:-1-115	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dB1	B:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dC1	C:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dD1	D:-1-115	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dE1	E:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dF1	F:-1-113	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dG1	G:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dH1	H:-1-112	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dI1	I:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dJ1	J:-1-113	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dK1	K:-1-114	Alpha-beta plaits	GlnB-like	GlnB-like
e2j9dL1	L:-1-113	Alpha-beta plaits	GlnB-like	GlnB-like

Structural contacts of domain e2j9dD1 of H-group "GlnB-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j9dE1	D:X,Y,Z->E:x,y,z	GlnB-like	Interaction Interface Pymol
e2j9dF1	D:X,Y,Z->F:x,y,z	GlnB-like	Interaction Interface Pymol
e2j9dC1	D:x,y,z->C:X,Y,Z	GlnB-like	Interaction Interface Pymol
e2j9dH1	D:X,Y,Z->H:x,y,z	GlnB-like	Interaction Interface Pymol
e2j9dL1	D:-X+3/2,-Y+2,Z-1/2->L:x,y,z	GlnB-like	Interaction Interface Pymol
e2j9dJ1	D:-X+1/2,-Y+2,Z-1/2->J:x,y,z	GlnB-like	Interaction Interface Pymol