ECOD: domain e2j9uD1

Domain ID e2j9uD1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Vps36-NZF-N

UID:	000088689
Type:	Automatic domain
Parent:	e2j9uB1
Range:	D:115-161
Ligands:	ZN
PDB:	2j9u
PDB Description:	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36
UniProt:	Q06696
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e2j9uD1

Domains in the same chain:

Download Pymol

e2j9uD1	D:115-161	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e2j9uA1	A:148-241	Four-helical up-and-down bundle	VPS28 C-terminal domain-like	VPS28 C-terminal domain-like
e2j9uB1	B:115-161	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2j9uC1	C:148-241	Four-helical up-and-down bundle	VPS28 C-terminal domain-like	VPS28 C-terminal domain-like
e2j9uD1	D:115-161	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e2j9uD1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2j9uC1	D:x,y,z->C:X,Y,Z	VPS28 C-terminal domain-like	Interaction Interface Pymol
e2j9uC1	D:X-1/2,-Y+1/2,-Z->C:x,y,z	VPS28 C-terminal domain-like	Interaction Interface Pymol
e2j9uB1	D:x,y,z->B:-X+1,Y,-Z+1/2	Rubredoxin-related	Interaction Interface Pymol