| UID: | 000000357 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:62-151 |
| PDB: | 2ja9 |
| PDB Description: | EXOSOME COMPLEX EXONUCLEASE RRP40 |
| UniProt: | Q08285 |
| Hsap BLAST neighbor: | Q9NQT5 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e2ja9A1
Domains in the same chain:
| e2ja9A1 | A:62-151 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e2ja9A2 | A:152-236 | Alpha-lytic protease prodomain-like | KH-domains | Eukaryotic type KH-domain (KH-domain type I) |
Domains in the same PDB:
| e2ja9A1 | A:62-151 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e2ja9A2 | A:152-236 | Alpha-lytic protease prodomain-like | KH-domains | Eukaryotic type KH-domain (KH-domain type I) |
Structural contacts of domain e2ja9A1 of H-group "Nucleic acid-binding proteins":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2ja9A2 | A:x,y,z->A:Y+1/4,X-1/4,-Z-1/4 | KH-domains | Interaction Interface Pymol |
| e2ja9A1 | A:x,y,z->A:Y+1/4,X-1/4,-Z-1/4 | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2ja9A2 | A:Y+1/4,X-1/4,-Z-1/4->A:x,y,z | KH-domains | Interaction Interface Pymol |
| e2ja9A1 | A:Y+1/4,X-1/4,-Z-1/4->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2ja9A1 | A:x,y,z->A:-X+3/2,Y,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2ja9A2 | A:x,y,z->A:-X+3/2,Y,-Z | KH-domains | Interaction Interface Pymol |
| e2ja9A2 | A:-X+3/2,Y,-Z->A:x,y,z | KH-domains | Interaction Interface Pymol |
| e2ja9A1 | A:-X+3/2,Y,-Z->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2ja9A2 | A:X+1/4,Z+3/4,-Y+3/4->A:x,y,z | KH-domains | Interaction Interface Pymol |
