ECOD: domain e2jdqD1

Domain ID e2jdqD1

A: a+b two layers
X: PB2 C-terminal domain-like
H: PB2 C-terminal domain-like
T: PB2 C-terminal domain-like
F: Flu_PB2_7th

UID:	000004950
Type:	Manual and representative domain
Range:	D:688-756
PDB:	2jdq
PDB Description:	POLYMERASE BASIC PROTEIN 2
UniProt:	P31345
Species:	Influenza A virus

Domain
In chain context
In PDB context

Structure of domain e2jdqD1

Domains in the same chain:

Download Pymol

e2jdqD1	D:688-756	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like

Domains in the same PDB:

e2jdqA1	A:84-507	Repetitive alpha hairpins	ARM repeat	ARM repeat
e2jdqB1	B:84-509	Repetitive alpha hairpins	ARM repeat	ARM repeat
e2jdqD1	D:688-756	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like
e2jdqE1	E:688-756	PB2 C-terminal domain-like	PB2 C-terminal domain-like	PB2 C-terminal domain-like

Structural contacts of domain e2jdqD1 of H-group "PB2 C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2jdqB1	D:x,y,z->B:X,Y,Z	ARM repeat	Interaction Interface Pymol
e2jdqA1	D:x,y,z->A:-X+1,Y-1/2,-Z+1/2	ARM repeat	Interaction Interface Pymol
e2jdqE1	D:x,y,z->E:-X+1,Y-1/2,-Z+1/2	PB2 C-terminal domain-like	Interaction Interface Pymol