ECOD: domain e2jimA2

Domain ID e2jimA2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Formate dehydrogenase/DMSO reductase, domains 2 and 3
T: Formate dehydrogenase/DMSO reductase, domains 2 and 3
F: Molybdopterin

UID:	001686018
Type:	Automatic domain
Parent:	e2jioA5
Range:	A:63-147,A:353-600
Ligands:	MGD MO UNX
PDB:	2jim
PDB Description:	PERIPLASMIC NITRATE REDUCTASE
UniProt:	P81186
Species:	Desulfovibrio desulfuricans

Domains in the same chain:

Download Pymol

e2jimA4	A:4-62	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e2jimA2	A:63-147,A:353-600	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jimA3	A:140-352	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jimA1	A:601-723	cradle loop barrel	RIFT-related	double psi

Domains in the same PDB:

e2jimA4	A:4-62	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e2jimA2	A:63-147,A:353-600	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jimA3	A:140-352	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e2jimA1	A:601-723	cradle loop barrel	RIFT-related	double psi

Structural contacts of domain e2jimA2 of H-group "Formate dehydrogenase/DMSO reductase, domains 2 and 3":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2jimA3	A:x,y,z->A:Y,X-1,-Z	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol
e2jimA1	A:x,y,z->A:Y,X-1,-Z	RIFT-related	Interaction Interface Pymol
e2jimA4	A:x,y,z->A:Y,X-1,-Z	Formate dehydrogenase/DMSO reductase, domain 1	Interaction Interface Pymol
e2jimA3	A:x,y,z->A:-X+2,-X+Y+1,-Z+1/3	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol
e2jimA3	A:-X+2,-X+Y+1,-Z+1/3->A:x,y,z	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Interaction Interface Pymol
e2jimA4	A:-Y+1,X-Y,Z+1/3->A:x,y,z	Formate dehydrogenase/DMSO reductase, domain 1	Interaction Interface Pymol